* New: In Katana::TrackCost, the TrackElement and it's optional
symmetric are now kept as attribute of a TrackCost. The cost
is completly computed inside the constructor.
TrackCost now support any mix of symmetric event and wide
segments.
The cost is now computed by adding directly to the current
one instead of creating secondaries that are merged afterwards.
As a consequence, remove all copy construction and merge
capabilities.
All the various methods used to compute the cost are renamed
"addOverlapcost()" in all the various related objects.
As a reminder, the overal cost method call is as follow:
1. TrackCost constructor on a TrackElement.
2. Call TrackElement::addOverlapcost()
3. For all Track under the TrackElement, call
Track::addOverlapCost()
4. For all other TrackElement intersecting with
the overlap interval call:
TrackElement::incOverlapCost()
5. The callback overlap function for segments
is called (defined in NegociateWidow).
Don't confuse:
- TrackElement::addOverlapCost(), which compute the cost of
inserting the segment inside a track (or a set of).
- TrackElement::incOverlapCost(), which compute the cost of
overlaping with this already inserted segment. It is the
other way around of the previous one.
* Change: In Katana::SegmentFsm, use a vector of pointer to TrackCost
instead of an object to avoid copy construction.
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