fix(chatpb): Update AddFile to support nested chat entries

- The AddFile function now correctly parses both the old flat log
  format and the new format where chats are grouped by topic.
- It flattens the new structure by iterating through the 'Entries'
  of a chat group and appending them to the main chat list.
- This allows the application to transparently load both old and
  new log files.

helpers.go

@@ -48,6 +48,14 @@ func UnmarshalChatsTEXT(data []byte) (*Chats, error) {
 }
 
 func (all *Chats) AddFile(filename string) error {
+	// Nil checks for safety.
+	if all == nil {
+		return fmt.Errorf("cannot call AddFile on a nil *Chats object")
+	}
+	if all.Chats == nil {
+		all.Chats = make([]*Chat, 0)
+	}
+
 	data, err := os.ReadFile(filename)
 	if err != nil {
 		log.Fatalf("Error reading file %s: %v", filename, err)
@@ -60,35 +68,89 @@ func (all *Chats) AddFile(filename string) error {
 		return err
 	}
 
-	for _, chat := range logData.GetChats() {
-		// make a copy
-		newc := proto.Clone(chat).(*Chat)
-
-		// Handle content: prefer content_file, fallback to content.
-		var content string
-		if contentFile := chat.GetContentFile(); contentFile != "" {
-			// Construct the full path relative to the log file's directory.
-			logDir := filepath.Dir(filename)
-			contentPath := filepath.Join(logDir, contentFile)
-
-			contentBytes, err := os.ReadFile(contentPath)
-			if err != nil {
-				content = fmt.Sprintf("---	ERROR: Could not read content file %s: %v ---", contentPath, err)
-			} else {
-				content = string(contentBytes)
+	// Iterate through the top-level messages from the source file.
+	for _, chatGroup := range logData.GetChats() {
+		if len(chatGroup.GetEntries()) > 0 {
+			// NEW FORMAT: This is a group, process its entries.
+			for _, entry := range chatGroup.GetEntries() {
+				// Convert the ChatEntry into a new Chat object for the flat list.
+				newChat := convertEntryToChat(entry, filename)
+				if newChat != nil {
+					newChat.VerifyUuid()
+					all.AppendByUuid(newChat)
+				}
 			}
 		} else {
-			// Fallback for older log formats.
-			content = chat.GetContent()
+			// OLD FORMAT: This is a single, flat Chat message.
+			// We still process it to handle its external content file correctly.
+			newChat := convertChatToChat(chatGroup, filename)
+			if newChat != nil {
+				newChat.VerifyUuid()
+				all.AppendByUuid(newChat)
+			}
 		}
-		newc.Content = content
-		newc.VerifyUuid()
-		all.AppendNew(newc)
 	}
-
 	return nil
 }
 
+// convertChatToChat handles an old-style Chat message. It creates a clean
+// copy and resolves its external content file.
+func convertChatToChat(chat *Chat, filename string) *Chat {
+	if chat == nil {
+		return nil
+	}
+
+	// Manually create a ChatEntry from the Chat fields to reuse the logic.
+	entry := &ChatEntry{
+		From:        chat.GetFrom(),
+		Ctime:       chat.GetCtime(),
+		Content:     chat.GetContent(),
+		Table:       chat.GetTable(),
+		ToolCalls:   chat.GetToolCalls(),
+		ContentFile: chat.GetContentFile(),
+		Uuid:        chat.GetUuid(),
+		Snippets:    chat.GetSnippets(),
+	}
+	return convertEntryToChat(entry, filename)
+}
+
+// convertEntryToChat creates a new Chat object from a ChatEntry's data
+// and resolves its external content file.
+func convertEntryToChat(entry *ChatEntry, filename string) *Chat {
+	if entry == nil {
+		return nil
+	}
+
+	// Create a new Chat object and copy the fields.
+	newChat := &Chat{
+		From:      entry.GetFrom(),
+		Ctime:     entry.GetCtime(),
+		Table:     entry.GetTable(),
+		ToolCalls: entry.GetToolCalls(),
+		Snippets:  entry.GetSnippets(),
+		Uuid:      entry.GetUuid(),
+	}
+
+	// Handle content: prefer content_file, fallback to content.
+	var content string
+	if contentFile := entry.GetContentFile(); contentFile != "" {
+		logDir := filepath.Dir(filename)
+		contentPath := filepath.Join(logDir, contentFile)
+		contentBytes, err := os.ReadFile(contentPath)
+		if err != nil {
+			content = fmt.Sprintf("--- ERROR: Could not read content file %s: %v ---", contentPath, err)
+		} else {
+			content = string(contentBytes)
+		}
+	} else {
+		content = entry.GetContent()
+	}
+	newChat.Content = content
+
+	return newChat
+}
+
+
 func (chats *Chats) VerifyUuids() bool {
 	var changed bool